A database for ITS2 sequences from nematodes
نویسندگان
چکیده
منابع مشابه
The ITS2 Database III—sequences and structures for phylogeny
The internal transcribed spacer 2 (ITS2) is a widely used phylogenetic marker. In the past, it has mainly been used for species level classifications. Nowadays, a wider applicability becomes apparent. Here, the conserved structure of the RNA molecule plays a vital role. We have developed the ITS2 Database (http://its2.bioapps.biozentrum.uni-wuerzburg.de) which holds information about sequence, ...
متن کاملThe ITS2 Database
The internal transcribed spacer 2 (ITS2) has been used as a phylogenetic marker for more than two decades. As ITS2 research mainly focused on the very variable ITS2 sequence, it confined this marker to low-level phylogenetics only. However, the combination of the ITS2 sequence and its highly conserved secondary structure improves the phylogenetic resolution(1) and allows phylogenetic inferenc...
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Karimipour Fard H. and Saeidi K. 2019. Biopesticides from entomopathogenic nematodes Plant Pathology Science 8(1): 60-73. DOI: 10.2982/PPS.8.1.60. In the recant decade, biopesticides with entomopathogenic nematodes (EPNs) have been developed with using different methods and materials. But the production of such biopesticides has always accompanied by some limitations such as low quality o...
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The database model presented in this paper is suitable for application in which queries may require non-crisp references to certain attributes. The data item (attribute) values may be crisp or fuzzy. For instance, such adjectives as 'high' or 'normal' may be attribute values for the attribute blood pressure. A disease or a condition can be described by a number of symptoms which may be crisp al...
متن کاملIdentification of commercial Ganoderma (Lingzhi) species by ITS2 sequences
BACKGROUND DNA barcoding can be used to authenticate Ganoderma species for safe use. This study aims to identify commercial products containing Ganoderma using DNA barcoding. METHODS We used 63 internal transcribed spacer (ITS) 2 sequences of Ganoderma species from 33 newly-sequenced wild samples, crude drugs, mycelia, spores, and authentic extracts and spore oils collected from various locat...
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ژورنال
عنوان ژورنال: BMC Genetics
سال: 2020
ISSN: 1471-2156
DOI: 10.1186/s12863-020-00880-0